BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H12SP1|AL426613
(515 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1611 931 0.0
>3x_Contig1611
Length = 15286
Score = 931 bits (465), Expect = 0.0
Identities = 502/516 (97%), Gaps = 3/516 (0%)
Strand = Plus / Minus
Query: 1 gcatacaagadaagatacacagacacaacacatatcgtgcgatatattagagggagtgtg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14669 gcatacaagaaaagatacacagacacaacacatatcgtgcgatatattagagggagtgtg 14610
Query: 61 ctaaagtgtaa-tgaacacctttgccttttttttcattcattccattccacatttgggat 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14609 ctaaagtgtaactgaacacctttgccttttttttcattcattccattccacatttgggat 14550
Query: 120 actcgtcccctttctttacgaatctcagccgggctttgtcatatctcaagcctgataaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14549 actcgtcccctttctttacgaatctcagccgggctttgtcatatctcaagcctgataaaa 14490
Query: 180 gatagacctggattgtcagctatacgtcgcgaataagtgctccggtggaatagaaatrat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 14489 gatagacctggattgtcagctatacgtcgcgaataagtgctccggtggaatagaaataat 14430
Query: 240 ardrgacgcctgttcaaatatctactctcaagttttcttccgtttttctcaagaaattgc 299
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14429 aaaagacgcctgttcaaatatctactctcaagttttcttccgtttttctcaagaaattgc 14370
Query: 300 tcgccttgcatctccaaatatttcaagactaagaataactactctttaggttgatattga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14369 tcgccttgcatctccaaatatttcaagactaagaataactactctttaggttgatattga 14310
Query: 360 agadatctctcatatttctgcattttwacggactaadactacaactgtctcatcaagata 419
||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 14309 agaaatctctcatatttctgcattttaacggactaaaactacaactgtctcatcaagata 14250
Query: 420 ctgtttcgttaacatcttcaaatacccgatatttttcttaacgagnagcatccaacgcga 479
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 14249 ctgtttcgttaacatcttcaaatacccgatatttttcttaacgagaagcatccaacg-ga 14191
Query: 480 aagtacgcttggtagggacccacctctaagctttgc 515
| ||||| |||||||| |||||||||||||||||||
Sbjct: 14190 acgtacg-ttggtaggaacccacctctaagctttgc 14156
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3574
Number of Sequences: 1807
Number of extensions: 3574
Number of successful extensions: 93
Number of sequences better than 1.0e-20: 1
length of query: 515
length of database: 10,358,551
effective HSP length: 16
effective length of query: 499
effective length of database: 10,329,639
effective search space: 5154489861
effective search space used: 5154489861
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)